Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Gigartinales
Family
  • Phyllophoraceae

References

Articles

See also:

Compare all annotations Downloads BLAST search View dataset information

Annotations Explorer: Ahnfeltiopsis flabelliformis CKXF

Overview

Assembly Details

Assembly name Ahnfeltiopsis flabelliformis CKXF
AlgaeDB ID Ahn_flab_CKXF
Source 1KP
Source ID CKXF
NCBI Txid 38507
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 25,517,125
Assembly BUSCO score C: 73.7 (S: 59.6 D: 14.1) F: 9.4 M: 16.9
Protein BUSCO score C: 49.1 (S: 42.4 D: 6.7) F: 7.5 M: 43.4
GC content 50.67
Gene count 4,194
Contigs 22,675
Contig N50 2,968
Contig L50 2,624
Scaffolds 21,986
Scaffold N50 3,071
Scaffold L50 2,540

Biosample Details

Biosample SAMEA104171182
Tissue branches and blades

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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