Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Gigartinales
Family
  • Solieriaceae

References

Articles

See also:

Compare all annotations Downloads BLAST search View dataset information

Annotations Explorer: Betaphycus philippinensis BWVJ

Overview

Assembly Details

Assembly name Betaphycus philippinensis BWVJ
AlgaeDB ID Beta_phil_BWVJ
Source 1KP
Source ID BWVJ
NCBI Txid 88415
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 23,061,284
Assembly BUSCO score C: 71.0 (S: 56.1 D: 14.9) F: 11.4 M: 17.6
Protein BUSCO score C: 40.4 (S: 32.9 D: 7.5) F: 11.0 M: 48.6
GC content 53.34
Gene count 4,138
Contigs 24,567
Contig N50 2,534
Contig L50 2,801
Scaffolds 24,161
Scaffold N50 2,577
Scaffold L50 2,763

Biosample Details

Biosample SAMEA104171183
Tissue branches

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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