Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Ceramiales
Family
  • Ceramiaceae
Subfamily
  • Ceramioideae
Subfamily
  • Ceramieae

References

Articles

See also:

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Annotations Explorer: Ceramium kondoi VZWX

Overview

Assembly Details

Assembly name Ceramium kondoi VZWX
AlgaeDB ID Cer_kond_VZWX
Source 1KP
Source ID VZWX
NCBI Txid 218449
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 18,141,136
Assembly BUSCO score C: 55.7 (S: 51.4 D: 4.3) F: 20.4 M: 23.9
Protein BUSCO score C: 38.4 (S: 35.3 D: 3.1) F: 16.1 M: 45.5
GC content 61.48
Gene count 3,837
Contigs 23,686
Contig N50 1,707
Contig L50 3,064
Scaffolds 22,997
Scaffold N50 1,773
Scaffold L50 2,969

Biosample Details

Biosample SAMEA104171174
Tissue branches

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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