Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Ceramiales
Family
  • Rhodomelaceae
Subfamily
  • Chondrieae

References

Articles

See also:

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Annotations Explorer: Chondria armata KPJ-CA19

Overview

Assembly Details

Assembly name Chondria armata KPJ-CA19
AlgaeDB ID Chon_arm_KPJ-CA19
Strain/Intraspecific name KPJ-CA19
Source NCBI
Source ID GCA_021653855.1
NCBI Txid 860625
Bioproject PRJNA762367
Year 2022
Assembly type Hologenome
Assembly level Scaffold
Sequencing technology Illumina NovaSeq; Oxford Nanopore MinION; Oxford Nanopore PromethION
Assembly method MaSuRCA v.3.4.2

Assembly Statistics

Assembly Length (bp) 507,564,393
Assembly BUSCO score C: 73.7 (S: 69.8 D: 3.9) F: 7.1 M: 19.2
Assembly coverage 80.0x
GC content 45.33
Gene count 25,131
Contigs 3,185
Contig N50 514,398
Contig L50 278
Scaffolds 2,990
Scaffold N50 643,002
Scaffold L50 226

Biosample Details

Biosample SAMN21392177
Location Japan: Kahoshima Prefecture, Kyushu Island
Tissue stype and blade

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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