Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Gigartinales
Family
  • Solieriaceae

References

Articles

See also:

Compare all annotations Downloads BLAST search View dataset information

Annotations Explorer: Eucheuma denticulatum JEBK

Overview

Assembly Details

Assembly name Eucheuma denticulatum JEBK
AlgaeDB ID Euch_dent_JEBK
Source 1KP
Source ID JEBK
NCBI Txid 305493
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 22,125,769
Assembly BUSCO score C: 71.0 (S: 61.6 D: 9.4) F: 9.8 M: 19.2
Protein BUSCO score C: 47.4 (S: 42.7 D: 4.7) F: 9.8 M: 42.8
GC content 52.77
Gene count 4,063
Contigs 25,484
Contig N50 2,209
Contig L50 3,086
Scaffolds 25,025
Scaffold N50 2,244
Scaffold L50 3,045

Biosample Details

Biosample SAMEA104171184
Tissue branches

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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