Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Gigartinales
Family
  • Endocladiaceae

References

Articles

See also:

Compare all annotations Downloads BLAST search View dataset information

Annotations Explorer: Gloiopeltis furcata SBLT

Overview

Assembly Details

Assembly name Gloiopeltis furcata SBLT
AlgaeDB ID Gloi_furca_SBLT
Source 1KP
Source ID SBLT
NCBI Txid 42017
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 19,495,300
Assembly BUSCO score C: 72.1 (S: 62.7 D: 9.4) F: 11.4 M: 16.5
Protein BUSCO score C: 49.4 (S: 44.7 D: 4.7) F: 8.6 M: 42.0
GC content 52.58
Gene count 4,024
Contigs 20,807
Contig N50 2,438
Contig L50 2,448
Scaffolds 20,184
Scaffold N50 2,521
Scaffold L50 2,388

Biosample Details

Biosample SAMEA104171179
Tissue branches and blades

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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