Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Ceramiales
Family
  • Delesseriaceae
Subfamily
  • Heterosiphonioideae

References

Articles

See also:

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Annotations Explorer: Heterosiphonia pulchra YSBD

Overview

Assembly Details

Assembly name Heterosiphonia pulchra YSBD
AlgaeDB ID Het_pul_YSBD
Source 1KP
Source ID YSBD
NCBI Txid 189631
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 23,403,852
Assembly BUSCO score C: 67.8 (S: 52.5 D: 15.3) F: 12.9 M: 19.3
Protein BUSCO score C: 36.1 (S: 29.0 D: 7.1) F: 11.0 M: 52.9
GC content 51.32
Gene count 4,602
Contigs 40,049
Contig N50 1,929
Contig L50 2,969
Scaffolds 39,345
Scaffold N50 1,992
Scaffold L50 2,867

Biosample Details

Biosample SAMEA104171175
Tissue branches

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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