Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Madagascaria erythrocladioides MMETSP1450
|
|
AlgaeDB ID
|
Mad_eryth_MMETSP1450-McKinnie2023 |
| Strain/Intraspecific name |
CCMP3234 |
|
Source
|
MMETSP_Vlierberghe
|
| Source ID |
MMETSP1450 |
| NCBI Txid |
753684
|
| Bioproject |
PRJNA248394
|
| Year |
2021 |
| Assembly type |
Transcriptome |
| Assembly level |
None |
| Sequencing technology |
Illumina |
| Assembly method |
BPA v1.0, BPA v2.0 |
Assembly Statistics
| Assembly Length (bp) |
33,247,345 |
| Assembly BUSCO score |
C: 50.2 (S: 36.9 D: 13.3) F: 32.9 M: 16.9
|
| Protein BUSCO score |
C: 36.8 (S: 28.2 D: 8.6) F: 26.3 M: 36.9
|
| GC content |
62.59 |
|
Gene count
|
16,988 |
| Contigs |
57,982 |
| Contig N50 |
720 |