Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Gigartinales
Family
  • Gigartinaceae

References

Articles

See also:

Compare all annotations Downloads BLAST search View dataset information

Annotations Explorer: Mazzaella japonica WEJN

Overview

Assembly Details

Assembly name Mazzaella japonica WEJN
AlgaeDB ID Maz_japon_WEJN
Source 1KP
Source ID WEJN
NCBI Txid 95356
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 21,206,646
Assembly BUSCO score C: 63.5 (S: 54.9 D: 8.6) F: 15.3 M: 21.2
Protein BUSCO score C: 43.5 (S: 38.4 D: 5.1) F: 12.9 M: 43.6
GC content 52.765
Gene count 4,566
Contigs 27,311
Contig N50 2,140
Contig L50 2,914
Scaffolds 26,703
Scaffold N50 2,213
Scaffold L50 2,839

Biosample Details

Biosample SAMEA104171181
Tissue blades

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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