Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Ceramiales
Family
  • Rhodomelaceae

References

Articles

See also:

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Annotations Explorer: Neosiphonia japonica XAXW

Overview

Assembly Details

Assembly name Neosiphonia japonica XAXW
AlgaeDB ID Neos_jap_XAXW
Source 1KP
Source ID XAXW
NCBI Txid 2608613
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 18,000,548
Assembly BUSCO score C: 52.5 (S: 49.4 D: 3.1) F: 22.0 M: 25.5
Protein BUSCO score C: 37.7 (S: 36.5 D: 1.2) F: 17.3 M: 45.0
GC content 41.29
Gene count 3,939
Contigs 25,144
Contig N50 1,606
Contig L50 3,200
Scaffolds 24,377
Scaffold N50 1,683
Scaffold L50 3,090

Biosample Details

Biosample SAMEA104171176
Tissue branches and blades

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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