Taxonomy:

Phylum

Rhodophyta

Subphylum

Eurhodophytina

Class

Florideophyceae

Subclass

Corallinophycidae

Order

Corallinales

Family

Porolithaceae

Subfamily

Porolithoideae

See also:

Compare all annotations Downloads BLAST search View dataset information

Annotations Explorer: Porolithon onkodes

Overview

Assembly Details

Assembly name	Porolithon onkodes
AlgaeDB ID	Por_onk_PU-Poon-v1
Strain/Intraspecific name	PU_Poon_v1
Source	NCBI
Source ID	GCA_029407785.1
NCBI Txid	231751
Bioproject	PRJNA774170
Year	2023
Assembly type	Genome
Assembly level	Scaffold
Sequencing technology	Illumina NovaSeq
Assembly method	ALGA v.1.0.3

Assembly Statistics

Assembly Length (bp)	224,708,768
Assembly BUSCO score	C: 70.2 (S: 67.1 D: 3.1) F: 9.4 M: 20.4
Assembly coverage	100.0x
GC content	46.0
Contigs	89,409
Contig N50	3,422
Contig L50	17,925
Scaffolds	68,138
Scaffold N50	4,610
Scaffold L50	12,227

Biosample Details

Biosample	SAMN22556604
Location	India: Andaman and Nicobar Islands
Tissue	Algal thallus
Growth stage/Age	adult

Downloads

Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au

To top