Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Rhodosorus marinus MMETSP0315
|
|
AlgaeDB ID
|
Rhod_mar_MMETSP0315-McKinnie2023 |
| Strain/Intraspecific name |
UTEX LB 2760 |
|
Source
|
MMETSP_Vlierberghe
|
| Source ID |
MMETSP0315 |
| NCBI Txid |
101924
|
| Bioproject |
PRJNA248394
|
| Year |
2021 |
| Assembly type |
Transcriptome |
| Assembly level |
None |
| Sequencing technology |
Illumina |
| Assembly method |
BPA v1.0, BPA v2.0 |
Assembly Statistics
| Assembly Length (bp) |
19,209,911 |
| Assembly BUSCO score |
C: 39.6 (S: 29.4 D: 10.2) F: 34.5 M: 25.9
|
| Protein BUSCO score |
C: 33.4 (S: 25.9 D: 7.5) F: 26.7 M: 39.9
|
| GC content |
50.08 |
|
Gene count
|
9,575 |
| Contigs |
25,364 |
| Contig N50 |
1,107 |