Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Ceramiales
Family
  • Rhodomelaceae
Subfamily
  • Pterosiphonieae

References

Articles

See also:

Compare all annotations Downloads BLAST search View dataset information

Annotations Explorer: Symphyocladia latiuscula UYFR

Overview

Assembly Details

Assembly name Symphyocladia latiuscula UYFR
AlgaeDB ID Symp_lat_UYFR
Source 1KP
Source ID UYFR
NCBI Txid 396806
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 18,498,696
Assembly BUSCO score C: 32.1 (S: 28.6 D: 3.5) F: 28.2 M: 39.7
Protein BUSCO score C: 20.8 (S: 18.4 D: 2.4) F: 22.4 M: 56.8
GC content 38.63
Gene count 4,209
Contigs 38,995
Contig N50 827
Contig L50 5,554
Scaffolds 37,839
Scaffold N50 889
Scaffold L50 5,248

Biosample Details

Biosample SAMEA104171177
Tissue branches and blades

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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