Taxonomy:

Phylum

Rhodophyta

Subphylum

Proteorhodophytina

Class

Porphyrideophyceae

Order

Porphyridiales

Family

Porphyridiaceae

Related assemblies

Erythrolobus madagascarensis MMETSP1354

References

Articles

See also:

Compare all annotations Downloads BLAST search View dataset information

Annotations Explorer: Erythrolobus australicus MMETSP1353

Overview

Note: This assembly has alternate annotation profiles published.

Assembly Details

Assembly name	Erythrolobus australicus MMETSP1353 Warnings Warning: Location The locational coordinates provided are invalid. However, switching the latitude and longitude values provides a location matching the general location description.
AlgaeDB ID	Eryth_aust_MMETSP1353-McKinnie2023
Strain/Intraspecific name	CCMP3124
Source	MMETSP_Vlierberghe
Source ID	MMETSP1353
NCBI Txid	1077150
Bioproject	PRJNA248394
Year	2021
Assembly type	Transcriptome
Assembly level	None
Sequencing technology	Illumina
Assembly method	BPA v1.0, BPA v2.0

Assembly Statistics

Assembly Length (bp)	13,392,163
Assembly BUSCO score	C: 38.4 (S: 34.5 D: 3.9) F: 23.1 M: 38.5
Protein BUSCO score	C: 36.4 (S: 32.9 D: 3.5) F: 15.7 M: 47.9
GC content	58.24
Gene count	6,556
Contigs	15,676
Contig N50	1,352

Biosample Details

Biosample	SAMN02740198
Location	Tasman Sea
Further information	https://www.moore.org/docs/default-source/Grantee-Resources/mmetsp-master-accession-key-7-7-2014.xlsx?sfvrsn=a8b8940d_0

Downloads

Search annotations by type

Search annotations by description

Search Enzyme annotations

Search KEGG annotations

Assembly summary graphs

Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au

To top