Taxonomy:

Phylum

Rhodophyta

Subphylum

Proteorhodophytina

Class

Porphyrideophyceae

Order

Porphyridiales

Family

Porphyridiaceae

Related assemblies

Erythrolobus australicus MMETSP1353

References

Articles

See also:

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Annotations Explorer: Erythrolobus madagascarensis MMETSP1354

Overview

Note: This assembly has alternate annotation profiles published.

Assembly Details

Assembly name	Erythrolobus madagascarensis MMETSP1354 Warnings Warning: Location The location coordinates provided describe a location in the North Atlantic Ocean, despite being labelled as being in the Indian Ocean. However, switching the latitute and longitude values provides a location matching the location description.
AlgaeDB ID	Eryth_mad_MMETSP1354-McKinnie2023
Strain/Intraspecific name	CCMP3276
Source	MMETSP_Vlierberghe
Source ID	MMETSP1354
NCBI Txid	708628
Bioproject	PRJNA248394
Year	2021
Assembly type	Transcriptome
Assembly level	None
Sequencing technology	Illumina
Assembly method	BPA v1.0, BPA v2.0

Assembly Statistics

Assembly Length (bp)	12,872,616
Assembly BUSCO score	C: 26.3 (S: 22.4 D: 3.9) F: 29.0 M: 44.7
Protein BUSCO score	C: 21.9 (S: 18.4 D: 3.5) F: 17.3 M: 60.8
GC content	54.93
Gene count	6,383
Contigs	17,856
Contig N50	1,034

Biosample Details

Biosample	SAMN02740208
Location	Indian Ocean
Further information	https://www.moore.org/docs/default-source/Grantee-Resources/mmetsp-master-accession-key-7-7-2014.xlsx?sfvrsn=a8b8940d_0

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au

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