Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Galdieria phlegrea Soos_GS
|
|
AlgaeDB ID
|
GphlegSoos |
| Strain/Intraspecific name |
Soos_GS |
|
Source
|
Dataset
|
| Source ID |
GCA_006232345.1 |
| NCBI Txid |
1389228
|
| Bioproject |
PRJNA512382
|
| Year |
2019 |
| Assembly type |
Genome |
| Assembly level |
Contig |
| Sequencing technology |
PacBio RSII |
| Assembly method |
Canu v.1.5 |
Assembly Statistics
| Assembly Length (bp) |
14,871,243 |
| Assembly BUSCO score |
C: 71.0 (S: 65.5 D: 5.5) F: 7.8 M: 21.2
|
| Protein BUSCO score |
C: 77.7 (S: 72.2 D: 5.5) F: 7.1 M: 15.2
|
| Assembly coverage |
65.0x |
| GC content |
37.52 |
|
Gene count
|
6,125 |
| Contigs |
108 |
| Contig N50 |
201,071 |
Biosample Details
| Biosample |
SAMN10666938 |
| Location |
Czeck Republic: Soos National Park
|
| Tissue |
cell culture |