Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Cyanidiophytina
Class
  • Cyanidiophyceae
Order
  • Galdieriales
Family
  • Galdieriaceae

Related assemblies



See also:

Compare all annotations Downloads BLAST search View dataset information

Annotations Explorer: Galdieria sulphuraria 107.79

Overview

Assembly Details

Assembly name Galdieria sulphuraria 107.79
AlgaeDB ID Gsulph107.79
Strain/Intraspecific name 107.79
Source NCBI
Source ID GCA_001704855.1
NCBI Txid 130081
Bioproject PRJNA330791
Year 2016
Assembly type Genome
Assembly level Contig
Sequencing technology ONT MinION
Assembly method Minimap/miniasm/nanopolish 17-Feb-2016

Assembly Statistics

Assembly Length (bp) 12,093,695
Assembly BUSCO score C: 1.2 (S: 1.2 D: 0.0) F: 0.0 M: 98.8
Protein BUSCO score C: 2.0 (S: 2.0 D: 0.0) F: 0.0 M: 98.0
Assembly coverage 50.0x
GC content 41.26
Contigs 117
Contig N50 134,001
Contig L50 35

Biosample Details

Biosample SAMN05426470
Location USA: Sonoma Co., CA
Tissue cell culture
Broad context acidic hot water
Local context ca. 0.1N sulfuric acid, hot water (70-75C)









Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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