Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Rhodella violacea MMETSP0314
|
|
AlgaeDB ID
|
Rhod_viol_MMETSP0314-McKinnie2023 |
| Strain/Intraspecific name |
CCMP736 |
|
Source
|
MMETSP_Vlierberghe
|
| Source ID |
MMETSP0314 |
| NCBI Txid |
2801
|
| Bioproject |
PRJNA248394
|
| Year |
2021 |
| Assembly type |
Transcriptome |
| Assembly level |
None |
| Sequencing technology |
Illumina |
| Assembly method |
BPA v1.0, BPA v2.0 |
Assembly Statistics
| Assembly Length (bp) |
17,399,637 |
| Assembly BUSCO score |
C: 36.1 (S: 34.1 D: 2.0) F: 27.5 M: 36.4
|
| Protein BUSCO score |
C: 22.8 (S: 21.2 D: 1.6) F: 13.3 M: 63.9
|
| GC content |
59.98 |
|
Gene count
|
5,896 |
| Contigs |
25,394 |
| Contig N50 |
940 |