Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Bonnemaisoniales
Family
  • Bonnemaisoniaceae

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References

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Annotations Explorer: Asparagopsis taxiformis SC

Overview

Assembly Details

Assembly name Asparagopsis taxiformis SC
AlgaeDB ID A_taxi_SC
Strain/Intraspecific name SC
Source NCBI
Source ID GCA_030407315.1
NCBI Txid 260499
Bioproject PRJNA809757
Year 2022
Assembly type Genome
Assembly level Scaffold
Sequencing technology PacBio; Illumina

Assembly Statistics

Assembly Length (bp) 142,472,235
Assembly BUSCO score C: 79.6 (S: 69.4 D: 10.2) F: 4.3 M: 16.1
Protein BUSCO score C: 72.1 (S: 62.7 D: 9.4) F: 6.3 M: 21.6
Assembly coverage 10.0x
GC content 49.87
Gene count 10,863
Contigs 6,717
Contig N50 1,377
Contig L50 701
Scaffolds 3,308
Scaffold N50 55,006
Scaffold L50 701

Biosample Details

Biosample SAMN26200911
Location Sunshine Coast, Australia
Tissue cultured sporophyte
Broad context Marine
Growth stage/Age sporophyte

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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