Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Cyanidiophytina
Class
  • Cyanidiophyceae
Order
  • Galdieriales
Family
  • Galdieriaceae

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Annotations Explorer: Galdieria partita NRBC 102759

Overview

Assembly Details

Assembly name Galdieria partita NRBC 102759
AlgaeDB ID Gpart_NRBC102759
Strain/Intraspecific name NRBC 102759
Source NCBI
Source ID GCA_025991245.1
NCBI Txid 83374
Bioproject PRJDB12742
Year 2022
Assembly type Genome
Assembly level Contig
Sequencing technology PacBio Sequel; Illumina NovaSeq 6000
Assembly method Canu v. 2.0; Racon v. 1.4.17; Pilon v. 1.2.3

Assembly Statistics

Assembly Length (bp) 17,969,193
Assembly BUSCO score C: 76.1 (S: 56.1 D: 20.0) F: 5.9 M: 18.0
Assembly coverage 800.0x
GC content 37.5
Contigs 82
Contig N50 225,451
Contig L50 32

Biosample Details

Biosample SAMD00436389
Location Japan: Kagoshima, Kodakarajima
Broad context thermo-acidic environment
Further information https://www.nite.go.jp/nbrc/catalogue/NBRCCatalogueDetailServlet?ID=NBRC&CAT=00102759

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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