Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Gracilariales
Family
  • Gracilariaceae
Subfamily
  • Gracilarioideae
Subfamily
  • Gracilariopsidae

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Annotations Explorer: Gracilariopsis chorda SKKU-2015

Overview

Assembly Details

Assembly name Gracilariopsis chorda SKKU-2015
AlgaeDB ID Grac_chor_SKKU-2015
Strain/Intraspecific name SKKU-2015
Source NCBI
Source ID GCA_003194525.1
NCBI Txid 448386
Bioproject PRJNA361418
Year 2018
Assembly type Genome
Assembly level Contig
Sequencing technology PacBio
Assembly method SMRTmake MAY2015

Assembly Statistics

Assembly Length (bp) 92,180,038
Assembly BUSCO score C: 78.4 (S: 77.6 D: 0.8) F: 3.9 M: 17.7
Protein BUSCO score C: 80.8 (S: 78.8 D: 2.0) F: 5.1 M: 14.1
Assembly coverage 88.0x
GC content 49.27
Gene count 10,806
Contigs 1,211
Contig N50 220,274
Contig L50 124

Biosample Details

Biosample SAMN06233403
Location South Korea: Jangheung, Jeonnam
Tissue whole body
Sex Female

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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