Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Gracilariales
Family
  • Gracilariaceae
Subfamily
  • Gracilarioideae
Subfamily
  • Gracilariopsidae

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Annotations Explorer: Gracilariopsis lemaneiformis 981

Overview

Assembly Details

Assembly name Gracilariopsis lemaneiformis 981
AlgaeDB ID Grac_leman_981
Strain/Intraspecific name 981
Source NCBI
Source ID GCA_003346895.1
NCBI Txid 2782
Bioproject PRJNA383985
Year 2018
Assembly type Genome
Assembly level Scaffold
Sequencing technology Illumina HiSeq; PacBio
Assembly method SOAPdenova v.2.0.4

Assembly Statistics

Assembly Length (bp) 88,693,116
Assembly BUSCO score C: 78.1 (S: 76.1 D: 2.0) F: 3.9 M: 18.0
Protein BUSCO score C: 74.9 (S: 72.2 D: 2.7) F: 5.1 M: 20.0
Assembly coverage 189.0x
GC content 49.94
Gene count 10,949
Contigs 28,583
Contig N50 29,144
Contig L50 715
Scaffolds 13,775
Scaffold N50 34,594
Scaffold L50 649

Biosample Details

Biosample SAMN06820827
Location China: Ningde, Fujian
Tissue whole algal thalli
Growth stage/Age tetrasporophyte

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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