Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Galdieria sulphuraria MtSh
|
|
AlgaeDB ID
|
GsulphMtSh |
| Strain/Intraspecific name |
MtSh |
|
Source
|
Dataset
|
| Source ID |
GCA_006232405.1 |
| NCBI Txid |
130081
|
| Bioproject |
PRJNA512382
|
| Year |
2019 |
| Assembly type |
Genome |
| Assembly level |
Contig |
| Sequencing technology |
PacBio RSII |
| Assembly method |
Canu v.1.5 |
Assembly Statistics
| Assembly Length (bp) |
14,998,623 |
| Assembly BUSCO score |
C: 65.9 (S: 61.2 D: 4.7) F: 7.1 M: 27.0
|
| Protein BUSCO score |
C: 72.9 (S: 68.2 D: 4.7) F: 7.5 M: 19.6
|
| Assembly coverage |
101.9x |
| GC content |
40.04 |
|
Gene count
|
6,159 |
| Contigs |
101 |
| Contig N50 |
186,619 |
Biosample Details
| Biosample |
SAMN10666934 |
| Location |
USA: Mount Shasta
|
| Tissue |
cell culture |