Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Galdieria sulphuraria RT22
|
|
AlgaeDB ID
|
GsulphRT22 |
| Strain/Intraspecific name |
RT22 |
|
Source
|
Dataset
|
| Source ID |
GCA_006232545.1 |
| NCBI Txid |
130081
|
| Bioproject |
PRJNA512382
|
| Year |
2019 |
| Assembly type |
Genome |
| Assembly level |
Contig |
| Sequencing technology |
PacBio RSII |
| Assembly method |
Canu v.1.6 |
Assembly Statistics
| Assembly Length (bp) |
15,626,563 |
| Assembly BUSCO score |
C: 75.3 (S: 71.0 D: 4.3) F: 5.9 M: 18.8
|
| Protein BUSCO score |
C: 78.8 (S: 74.1 D: 4.7) F: 6.7 M: 14.5
|
| Assembly coverage |
91.2x |
| GC content |
37.43 |
|
Gene count
|
6,982 |
| Contigs |
118 |
| Contig N50 |
172,878 |
Biosample Details
| Biosample |
SAMN10666930 |
| Location |
Spain: Rio Tinto near Berrocal
|
| Tissue |
cell culture |