Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Galdieria sulphuraria YNP5578.1
|
|
AlgaeDB ID
|
GsulphYNP5578.1 |
| Strain/Intraspecific name |
YNP5578.1 |
|
Source
|
Dataset
|
| Source ID |
GCA_006232335.1 |
| NCBI Txid |
130081
|
| Bioproject |
PRJNA512382
|
| Year |
2019 |
| Assembly type |
Genome |
| Assembly level |
Contig |
| Sequencing technology |
PacBio RSII |
| Assembly method |
Canu v.1.6 |
Assembly Statistics
| Assembly Length (bp) |
14,439,647 |
| Assembly BUSCO score |
C: 73.4 (S: 71.0 D: 2.4) F: 5.1 M: 21.5
|
| Protein BUSCO score |
C: 77.6 (S: 74.5 D: 3.1) F: 7.5 M: 14.9
|
| Assembly coverage |
53.4x |
| GC content |
40.05 |
|
Gene count
|
6,118 |
| Contigs |
115 |
| Contig N50 |
170,797 |
| Contig L50 |
31 |
Biosample Details
| Biosample |
SAMN10666937 |
| Location |
USA: Nymph Creek, Yellowstone National Park
|
| Tissue |
cell culture |