Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Bangiophyceae
Subclass
  • Bangiophycidae
Order
  • Bangiales
Family
  • Bangiaceae

Related assemblies


References

Articles

External Links


See also:

Downloads BLAST search View dataset information

Annotations Explorer: Neoporphyra haitanensis PH40

Overview

Assembly Details

Assembly name Neoporphyra haitanensis PH40
AlgaeDB ID Porp_hait_PH40
Strain/Intraspecific name PH40
Source NCBI
Source ID GCA_008729055.1
NCBI Txid 1262161
Bioproject PRJNA503796
Year 2019
Assembly type Genome
Assembly level Scaffold
Sequencing technology PacBio RSII
Assembly method HGAP v.3

Assembly Statistics

Assembly Length (bp) 53,254,617
Assembly BUSCO score C: 27.9 (S: 26.7 D: 1.2) F: 9.0 M: 63.1
Protein BUSCO score C: 36.9 (S: 35.7 D: 1.2) F: 9.8 M: 53.3
Assembly coverage 100.0x
GC content 71.26
Gene count 5,689
Contigs 283
Contig N50 1,068,871
Contig L50 15
Scaffolds 194
Scaffold N50 5,758,810
Scaffold L50 4

Biosample Details

Biosample SAMN10373787
Location China: Nanri Island, Fujian
Tissue thallus
Sex Female

Search annotations by type

Annotation profile

Search annotations by description

Search Enzyme annotations

Search KEGG annotations











Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






To top