Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Bangiophyceae
Subclass
  • Bangiophycidae
Order
  • Bangiales
Family
  • Bangiaceae

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Annotations Explorer: Neoporphyra haitanensis ZD1

Overview

Assembly Details

Assembly name Neoporphyra haitanensis ZD1
AlgaeDB ID Porp_hait_ZD1
Strain/Intraspecific name ZD1
Source NCBI
Source ID GCA_021651115.1
NCBI Txid 1262161
Bioproject PRJNA717322
Year 2022
Assembly type Genome
Assembly level Chromosome
Sequencing technology PacBio Sequel
Assembly method Falcon v.0.2.2

Assembly Statistics

Assembly Length (bp) 49,666,066
Assembly BUSCO score C: 23.5 (S: 23.1 D: 0.4) F: 9.0 M: 67.5
Protein BUSCO score C: 33.8 (S: 31.8 D: 2.0) F: 13.7 M: 52.5
Assembly coverage 195.1x
GC content 70.12
Gene count 5,806
Contigs 256
Contig N50 650,156
Contig L50 26
Scaffolds 146
Scaffold N50 7,796,351
Scaffold L50 3

Biosample Details

Biosample SAMN18498582
Location China: Ningbo City, Zheijiang Province
Tissue conchocelis

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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