Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Halymeniales
Family
  • Grateloupiaceae

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References

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Annotations Explorer: Grateloupia filicina ZJOJ

Overview

Assembly Details

Assembly name Grateloupia filicina ZJOJ
AlgaeDB ID Grat_fil_JZOJ
Source 1KP
Source ID ZJOJ
NCBI Txid 31455
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 30,251,908
Assembly BUSCO score C: 72.6 (S: 62.0 D: 10.6) F: 12.9 M: 14.5
Protein BUSCO score C: 49.8 (S: 43.1 D: 6.7) F: 15.3 M: 34.9
GC content 51.07
Gene count 7,156
Contigs 57,279
Contig N50 1,407
Contig L50 5,417
Scaffolds 56,234
Scaffold N50 1,457
Scaffold L50 5,288

Biosample Details

Biosample SAMEA104171190
Tissue branches and blades

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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