Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Halymeniales
Family
  • Grateloupiaceae

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Annotations Explorer: Grateloupia livida IKIZ

Overview

Assembly Details

Assembly name Grateloupia livida IKIZ
AlgaeDB ID Grat_liv_IKIZ
Source 1KP
Source ID IKIZ
NCBI Txid 118374
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 17,853,008
Assembly BUSCO score C: 70.6 (S: 65.5 D: 5.1) F: 11.0 M: 18.4
Protein BUSCO score C: 45.1 (S: 41.6 D: 3.5) F: 10.2 M: 44.7
GC content 50.31
Gene count 3,767
Contigs 14,722
Contig N50 2,607
Contig L50 2,187
Scaffolds 14,254
Scaffold N50 2,788
Scaffold L50 2,126

Biosample Details

Biosample SAMEA104171191
Tissue blades

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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