Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Halymeniales
Family
  • Grateloupiaceae

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Annotations Explorer: Grateloupia turuturu URSB

Overview

Assembly Details

Assembly name Grateloupia turuturu URSB
AlgaeDB ID Grat_tur_URSB
Source 1KP
Source ID URSB
NCBI Txid 118375
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 20,128,755
Assembly BUSCO score C: 75.3 (S: 69.8 D: 5.5) F: 8.2 M: 16.5
Protein BUSCO score C: 49.5 (S: 47.5 D: 2.0) F: 9.4 M: 41.1
GC content 48.74
Gene count 3,924
Contigs 15,529
Contig N50 2,714
Contig L50 2,370
Scaffolds 15,113
Scaffold N50 2,772
Scaffold L50 3,239

Biosample Details

Biosample SAMEA104171192
Tissue blades

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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