Annotations Explorer: Porphyridium cruentum OBUY

Overview

Assembly Details

Assembly name Porphyridium cruentum OBUY
AlgaeDB ID Por_cru_OBUY
Source 1KP
Source ID OBUY
NCBI Txid 2891951
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 12,465,703
Assembly BUSCO score C: 29.8 (S: 28.6 D: 1.2) F: 26.7 M: 43.5
Protein BUSCO score C: 20.4 (S: 19.6 D: 0.8) F: 18.4 M: 61.2
GC content 55.38
Gene count 3,569
Contigs 18,943
Contig N50 1,427
Contig L50 2,769
Scaffolds 18,241
Scaffold N50 1,503
Scaffold L50 2,667

Biosample Details

Biosample SAMEA104171168
Tissue cells grown on F/2 media

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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