Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Proteorhodophytina
Class
  • Porphyrideophyceae
Order
  • Porphyridiales
Family
  • Porphyridiaceae

Related assemblies



See also:

Compare all annotations Downloads BLAST search View dataset information

Annotations Explorer: Porphyridium purpureum GCA_000397085.1

Overview

Assembly Details

Assembly name Porphyridium purpureum GCA_000397085.1
AlgaeDB ID Por_purp_GCA_000397085.1
Source NCBI
Source ID GCA_000397085.1
NCBI Txid 35688
Bioproject PRJNA189757
Year 2013
Assembly type Genome
Assembly level Contig
Sequencing technology Illumina GAIIx
Assembly method CLC NGS Cell v Mar-2012

Assembly Statistics

Assembly Length (bp) 19,451,899
Assembly BUSCO score C: 71.4 (S: 71.0 D: 0.4) F: 7.8 M: 20.8
Protein BUSCO score C: 69.8 (S: 69.8 D: 0.0) F: 7.8 M: 22.4
Assembly coverage 376.0x
GC content 55.5
Gene count 7,182
Contigs 3,014
Contig N50 20,534
Contig L50 270

Biosample Details

Biosample SAMN02981527

Search annotations by type

Search annotations by description

Search Enzyme annotations

Search KEGG annotations

Assembly summary graphs










Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






To top