Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Gracilariales
Family
  • Gracilariaceae
Subfamily
  • Gracilarioideae
Subfamily
  • Gracilarieae

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References

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Annotations Explorer: Gracilaria chouae FTRP

Overview

Assembly Details

Assembly name Gracilaria chouae FTRP
AlgaeDB ID Grac_chou_FTRP
Source 1KP
Source ID FTRP
NCBI Txid 1172980
Bioproject PRJEB21674
Year 2019
Assembly type Transcriptome
Assembly level Scaffold
Sequencing technology Illumina HiSeq 2000
Assembly method SOAPdenovo

Assembly Statistics

Assembly Length (bp) 19,661,331
Assembly BUSCO score C: 75.6 (S: 62.7 D: 12.9) F: 8.2 M: 16.2
Protein BUSCO score C: 47.5 (S: 42.0 D: 5.5) F: 6.7 M: 45.8
GC content 50.19
Gene count 3,558
Contigs 12,437
Contig N50 3,676
Contig L50 1,680
Scaffolds 12,072
Scaffold N50 3,816
Scaffold L50 1,637

Biosample Details

Biosample SAMEA104171186
Tissue blades

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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