| Assembly name | Gracilaria domingensis SP 400837 |
|---|---|
| AlgaeDB ID | Grac_dom_SP400837 |
| Strain/Intraspecific name | SP 400837 |
| Source | NCBI |
| Source ID | GCA_022539475.1 |
| NCBI Txid | 172961 |
| Bioproject | PRJNA544476 |
| Year | 2022 |
| Assembly type | Genome |
| Assembly level | Scaffold |
| Sequencing technology | PacBio RSII |
| Assembly method | miniasm v.0.2 |
| Assembly Length (bp) | 77,948,086 |
|---|---|
| Assembly BUSCO score | C: 74.1 (S: 72.5 D: 1.6) F: 4.7 M: 21.2 |
| Protein BUSCO score | C: 60.4 (S: 60.0 D: 0.4) F: 8.6 M: 31.0 |
| Assembly coverage | 180.0x |
| GC content | 50.23 |
| Gene count | 11,532 |
| Contigs | 1,100 |
| Contig N50 | 133,586 |
| Contig L50 | 165 |
| Scaffolds | 686 |
| Scaffold N50 | 189,322 |
| Scaffold L50 | 117 |
| Biosample | SAMN11840808 |
|---|---|
| Location | Brazil: Santa Catarina, Lagoinha beach |
| Broad context | Marine |
| Local context | Intertidal zone (ENVO:00000316) |
| Growth stage/Age | |
| Sex |
Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au