Taxonomy:

Phylum
  • Rhodophyta
Subphylum
  • Eurhodophytina
Class
  • Florideophyceae
Subclass
  • Rhodymeniophycidae
Order
  • Gracilariales
Family
  • Gracilariaceae
Subfamily
  • Gracilarioideae
Subfamily
  • Gracilarieae

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Annotations Explorer: Gracilaria vermiculophylla HapMaleFtJ-2017

Overview

Assembly Details

Assembly name Gracilaria vermiculophylla HapMaleFtJ-2017
AlgaeDB ID Grac_verm_HapMaleFtJ-2017
Strain/Intraspecific name HapMaleFtJ-2017
Source NCBI
Source ID GCA_019155205.2
NCBI Txid 2608709
Bioproject PRJNA700770
Year 2021
Assembly type Genome
Assembly level Scaffold
Sequencing technology Illumina
Assembly method Dovetail HiRise Sep2017

Assembly Statistics

Assembly Length (bp) 47,804,795
Assembly BUSCO score C: 60.4 (S: 60.0 D: 0.4) F: 4.3 M: 35.3
Protein BUSCO score C: 59.6 (S: 59.6 D: 0.0) F: 5.1 M: 35.3
Assembly coverage 1000.0x
GC content 47.65
Gene count 4,614
Contigs 7,046
Contig N50 13,335
Contig L50 977
Scaffolds 730
Scaffold N50 2,062,363
Scaffold L50 10

Biosample Details

Biosample SAMN17860744
Location USA: Fort Johnson, Charleston, SC

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Feedback

Is this information correct? Do you have data you want to add to this database? Got any questions? If so, please contact me at Lachlan.McKinnie@research.usc.edu.au






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