Overview
Note: This assembly has alternate annotation profiles published.
Assembly Details
| Assembly name |
Porphyridium aerugineum MMETSP0313
|
|
AlgaeDB ID
|
Por_aeru_MMETSP0313-McKinnie2023 |
| Strain/Intraspecific name |
SAG 1380-2 |
|
Source
|
MMETSP_Vlierberghe
|
| Source ID |
MMETSP0313 |
| NCBI Txid |
2792
|
| Bioproject |
PRJNA248394
|
| Year |
2021 |
| Assembly type |
Transcriptome |
| Assembly level |
None |
| Sequencing technology |
Illumina |
| Assembly method |
BPA v1.0, BPA v2.0 |
Assembly Statistics
| Assembly Length (bp) |
15,731,035 |
| Assembly BUSCO score |
C: 34.9 (S: 31.0 D: 3.9) F: 23.9 M: 41.2
|
| Protein BUSCO score |
C: 32.9 (S: 29.4 D: 3.5) F: 19.6 M: 47.5
|
| GC content |
48.89 |
|
Gene count
|
10,866 |
| Contigs |
22,715 |
| Contig N50 |
963 |